src/phenotypebinary.h


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#ifndef GENETIC_PHENOTYPE_BINARY_H
#define GENETIC_PHENOTYPE_BINARY_H

#include "genetic/phenotype.h"

#include <bu/stream.h>

namespace Genetic
{
	class PhenotypeBinary : public Phenotype
	{
	public:
		PhenotypeBinary( int iSize, bool bRandom=false );
		virtual ~PhenotypeBinary();

		virtual int getSize() { return iSize; }
		virtual Phenotype &randomize();
		virtual void mutate( int iLocation, float fMagnitude );		
		virtual Phenotype *makeEmptyOffspring( int iNewSize=-1 );
		virtual Phenotype &copyFrom( const Phenotype &rSrc, int iStart,
				int iCount, int iDest=-1 );
		virtual Bu::String toString();

		void extractBits( uint32_t &rTarget, int iStart, int iBits );
		void extractBits( uint64_t &rTarget, int iStart, int iBits );

		void write( Bu::Stream &rStream );
		void read( Bu::Stream &rStream );

	private:
		int iSize;
		int iWords;
		uint_fast32_t *aGenes;
	};
};

#endif